joshua.pro.PROCore Class Reference

Collaboration diagram for joshua.pro.PROCore:

List of all members.

Public Member Functions
	PROCore ()
	PROCore (String[] args)
	PROCore (String configFileName)
void	run_PRO ()
void	run_PRO (int minIts, int maxIts, int prevIts)
double[]	run_single_iteration (int iteration, int minIts, int maxIts, int prevIts, int earlyStop, int[] maxIndex)
void	finish ()
Static Public Member Functions
static void	main (String[] args)
Package Attributes
int	minMERTIterations
int	prevMERTIterations
String	docInfoFileName
String	finalLambdaFileName
String	refFileName
String	decoderOutFileName
String	decoderCommandFileName
String	fakeFileNamePrefix
String	fakeFileNameSuffix
Private Member Functions
void	initialize (int randsToSkip)
String	lambdaToString (double[] lambdaA)
String[]	run_decoder (int iteration)
void	produceTempFiles (String nbestFileName, int iteration)
void	createConfigFile (double[] params, String cfgFileName, String templateFileName)
void	processParamFile ()
void	processDocInfo ()
boolean	copyFile (String origFileName, String newFileName)
void	renameFile (String origFileName, String newFileName)
void	deleteFile (String fileName)
void	writeLine (String line, BufferedWriter writer) throws IOException
String[]	cfgFileToArgsArray (String fileName)
void	processArgsArray (String[] args)
void	processArgsArray (String[] args, boolean firstTime)
void	set_docSubsetInfo (int[] info)
void	checkFile (String fileName)
boolean	fileExists (String fileName)
void	gzipFile (String inputFileName)
void	gzipFile (String inputFileName, String gzippedFileName)
void	gunzipFile (String gzippedFileName)
void	gunzipFile (String gzippedFileName, String outputFileName)
String	createUnifiedRefFile (String prefix, int numFiles)
String	normalize (String str, int normMethod)
int	countLines (String fileName)
int	countNonEmptyLines (String fileName)
String	fullPath (String dir, String fileName)
void	cleanupMemory ()
void	cleanupMemorySilently ()
void	cleanupMemory (int reps, boolean silent)
void	printMemoryUsage ()
void	println (Object obj, int priority)
void	print (Object obj, int priority)
void	println (Object obj)
void	print (Object obj)
void	showProgress ()
double[]	randomLambda ()
double[]	randomPerturbation (double[] origLambda, int i, double method, double param, double mult)
int	c_fromParamName (String pName)
void	setFeats (double[][][] featVal_array, int i, int[] lastUsedIndex, int[] maxIndex, double[] featVal)
HashSet< Integer >	indicesToDiscard (double[] slope, double[] offset)
Private Attributes
TreeSet< Integer >[]	indicesOfInterest_all
final Runtime	myRuntime = Runtime.getRuntime()
int	progress
int	verbosity
Random	randGen
int	generatedRands
int	numSentences
int	numDocuments
int[]	docOfSentence
int[]	docSubsetInfo
int	refsPerSen
int	textNormMethod
int	numParams
int	numSparseParams = 0
int	numParamsInFile
String	discDefFile
double[]	sparseFeatWeights
double[]	normalizationOptions
String[]	paramNames
double[]	lambda
boolean[]	isOptimizable
double[]	minThValue
double[]	maxThValue
double[]	minRandValue
double[]	maxRandValue
int	damianos_method
double	damianos_param
double	damianos_mult
double[]	defaultLambda
JoshuaDecoder	myDecoder
String	decoderCommand
int	decVerbosity
int	validDecoderExitValue
int	numOptThreads
int	saveInterFiles
int	compressFiles
int	sizeOfNBest
long	seed
boolean	randInit
int	initsPerIt
int	maxMERTIterations
double	stopSigValue
int	stopMinIts
boolean	oneModificationPerIteration
String	metricName
String	metricName_display
String[]	metricOptions
EvaluationMetric	evalMetric
int	suffStatsCount
String	tmpDirPrefix
int	passIterationToDecoder
String	classifierAlg
String	trainingMode
String	nbestFormat
String[]	classifierParams = null
int	Tau
int	Xi
double	interCoef
double	metricDiff
String	dirPrefix
String	paramsFileName
String	sourceFileName
String	decoderConfigFileName
String	fakeFileNameTemplate
Static Private Attributes
static final DecimalFormat	f4 = new DecimalFormat("###0.0000")
static final double	NegInf = (-1.0 / 0.0)
static final double	PosInf = (+1.0 / 0.0)
static final double	epsilon = 1.0 / 1000000

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Constructor & Destructor Documentation

joshua.pro.PROCore.PROCore

(

)

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joshua.pro.PROCore.PROCore

(

String[]

args

)

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joshua.pro.PROCore.PROCore

(

String

configFileName

)

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Member Function Documentation

int joshua.pro.PROCore.c_fromParamName

(

String

pName

)

[private]

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String [] joshua.pro.PROCore.cfgFileToArgsArray

(

String

fileName

)

[private]

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void joshua.pro.PROCore.checkFile

(

String

fileName

)

[private]

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void joshua.pro.PROCore.cleanupMemory

(

)

[private]

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void joshua.pro.PROCore.cleanupMemory	(	int	reps,
		boolean	silent
	)		[private]

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void joshua.pro.PROCore.cleanupMemorySilently

(

)

[private]

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boolean joshua.pro.PROCore.copyFile	(	String	origFileName,
		String	newFileName
	)		[private]

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int joshua.pro.PROCore.countLines

(

String

fileName

)

[private]

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int joshua.pro.PROCore.countNonEmptyLines

(

String

fileName

)

[private]

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void joshua.pro.PROCore.createConfigFile	(	double[]	params,
		String	cfgFileName,
		String	templateFileName
	)		[private]

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String joshua.pro.PROCore.createUnifiedRefFile	(	String	prefix,
		int	numFiles
	)		[private]

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void joshua.pro.PROCore.deleteFile

(

String

fileName

)

[private]

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boolean joshua.pro.PROCore.fileExists

(

String

fileName

)

[private]

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void joshua.pro.PROCore.finish

(

)

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String joshua.pro.PROCore.fullPath	(	String	dir,
		String	fileName
	)		[private]

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void joshua.pro.PROCore.gunzipFile

(

String

gzippedFileName

)

[private]

void joshua.pro.PROCore.gunzipFile	(	String	gzippedFileName,
		String	outputFileName
	)		[private]

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void joshua.pro.PROCore.gzipFile

(

String

inputFileName

)

[private]

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void joshua.pro.PROCore.gzipFile	(	String	inputFileName,
		String	gzippedFileName
	)		[private]

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HashSet<Integer> joshua.pro.PROCore.indicesToDiscard	(	double[]	slope,
		double[]	offset
	)		[private]

void joshua.pro.PROCore.initialize

(

int

randsToSkip

)

[private]

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String joshua.pro.PROCore.lambdaToString

(

double[]

lambdaA

)

[private]

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static void joshua.pro.PROCore.main

(

String[]

args

)

[static]

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String joshua.pro.PROCore.normalize	(	String	str,
		int	normMethod
	)		[private]

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void joshua.pro.PROCore.print	(	Object	obj,
		int	priority
	)		[private]

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void joshua.pro.PROCore.print

(

Object

obj

)

[private]

void joshua.pro.PROCore.println	(	Object	obj,
		int	priority
	)		[private]

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void joshua.pro.PROCore.println

(

Object

obj

)

[private]

void joshua.pro.PROCore.printMemoryUsage

(

)

[private]

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void joshua.pro.PROCore.processArgsArray

(

String[]

args

)

[private]

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void joshua.pro.PROCore.processArgsArray	(	String[]	args,
		boolean	firstTime
	)		[private]

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void joshua.pro.PROCore.processDocInfo

(

)

[private]

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void joshua.pro.PROCore.processParamFile

(

)

[private]

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void joshua.pro.PROCore.produceTempFiles	(	String	nbestFileName,
		int	iteration
	)		[private]

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double [] joshua.pro.PROCore.randomLambda

(

)

[private]

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double [] joshua.pro.PROCore.randomPerturbation	(	double[]	origLambda,
		int	i,
		double	method,
		double	param,
		double	mult
	)		[private]

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void joshua.pro.PROCore.renameFile	(	String	origFileName,
		String	newFileName
	)		[private]

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String [] joshua.pro.PROCore.run_decoder

(

int

iteration

)

[private]

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void joshua.pro.PROCore.run_PRO

(

)

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void joshua.pro.PROCore.run_PRO	(	int	minIts,
		int	maxIts,
		int	prevIts
	)

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double [] joshua.pro.PROCore.run_single_iteration	(	int	iteration,
		int	minIts,
		int	maxIts,
		int	prevIts,
		int	earlyStop,
		int[]	maxIndex
	)

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void joshua.pro.PROCore.set_docSubsetInfo

(

int[]

info

)

[private]

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void joshua.pro.PROCore.setFeats	(	double	featVal_array[][][],
		int	i,
		int[]	lastUsedIndex,
		int[]	maxIndex,
		double[]	featVal
	)		[private]

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void joshua.pro.PROCore.showProgress

(

)

[private]

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void joshua.pro.PROCore.writeLine	(	String	line,
		BufferedWriter	writer
	)		throws IOException [private]

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Member Data Documentation

String joshua.pro.PROCore.classifierAlg [private]

String [] joshua.pro.PROCore.classifierParams = null [private]

int joshua.pro.PROCore.compressFiles [private]

int joshua.pro.PROCore.damianos_method [private]

double joshua.pro.PROCore.damianos_mult [private]

double joshua.pro.PROCore.damianos_param [private]

String joshua.pro.PROCore.decoderCommand [private]

String joshua.pro.PROCore.decoderCommandFileName [package]

String joshua.pro.PROCore.decoderConfigFileName [private]

String joshua.pro.PROCore.decoderOutFileName [package]

int joshua.pro.PROCore.decVerbosity [private]

double [] joshua.pro.PROCore.defaultLambda [private]

String joshua.pro.PROCore.dirPrefix [private]

String joshua.pro.PROCore.discDefFile [private]

String joshua.pro.PROCore.docInfoFileName [package]

int [] joshua.pro.PROCore.docOfSentence [private]

int [] joshua.pro.PROCore.docSubsetInfo [private]

final double joshua.pro.PROCore.epsilon = 1.0 / 1000000 [static, private]

EvaluationMetric joshua.pro.PROCore.evalMetric [private]

final DecimalFormat joshua.pro.PROCore.f4 = new DecimalFormat("###0.0000") [static, private]

String joshua.pro.PROCore.fakeFileNamePrefix [package]

String joshua.pro.PROCore.fakeFileNameSuffix [package]

String joshua.pro.PROCore.fakeFileNameTemplate [private]

String joshua.pro.PROCore.finalLambdaFileName [package]

int joshua.pro.PROCore.generatedRands [private]

TreeSet<Integer> [] joshua.pro.PROCore.indicesOfInterest_all [private]

int joshua.pro.PROCore.initsPerIt [private]

double joshua.pro.PROCore.interCoef [private]

boolean [] joshua.pro.PROCore.isOptimizable [private]

double [] joshua.pro.PROCore.lambda [private]

int joshua.pro.PROCore.maxMERTIterations [private]

double [] joshua.pro.PROCore.maxRandValue [private]

double [] joshua.pro.PROCore.maxThValue [private]

double joshua.pro.PROCore.metricDiff [private]

String joshua.pro.PROCore.metricName [private]

String joshua.pro.PROCore.metricName_display [private]

String [] joshua.pro.PROCore.metricOptions [private]

int joshua.pro.PROCore.minMERTIterations [package]

double [] joshua.pro.PROCore.minRandValue [private]

double [] joshua.pro.PROCore.minThValue [private]

JoshuaDecoder joshua.pro.PROCore.myDecoder [private]

final Runtime joshua.pro.PROCore.myRuntime = Runtime.getRuntime() [private]

String joshua.pro.PROCore.nbestFormat [private]

final double joshua.pro.PROCore.NegInf = (-1.0 / 0.0) [static, private]

double [] joshua.pro.PROCore.normalizationOptions [private]

int joshua.pro.PROCore.numDocuments [private]

int joshua.pro.PROCore.numOptThreads [private]

int joshua.pro.PROCore.numParams [private]

int joshua.pro.PROCore.numParamsInFile [private]

int joshua.pro.PROCore.numSentences [private]

int joshua.pro.PROCore.numSparseParams = 0 [private]

boolean joshua.pro.PROCore.oneModificationPerIteration [private]

String [] joshua.pro.PROCore.paramNames [private]

String joshua.pro.PROCore.paramsFileName [private]

int joshua.pro.PROCore.passIterationToDecoder [private]

final double joshua.pro.PROCore.PosInf = (+1.0 / 0.0) [static, private]

int joshua.pro.PROCore.prevMERTIterations [package]

int joshua.pro.PROCore.progress [private]

Random joshua.pro.PROCore.randGen [private]

boolean joshua.pro.PROCore.randInit [private]

String joshua.pro.PROCore.refFileName [package]

int joshua.pro.PROCore.refsPerSen [private]

int joshua.pro.PROCore.saveInterFiles [private]

long joshua.pro.PROCore.seed [private]

int joshua.pro.PROCore.sizeOfNBest [private]

String joshua.pro.PROCore.sourceFileName [private]

double [] joshua.pro.PROCore.sparseFeatWeights [private]

int joshua.pro.PROCore.stopMinIts [private]

double joshua.pro.PROCore.stopSigValue [private]

int joshua.pro.PROCore.suffStatsCount [private]

int joshua.pro.PROCore.Tau [private]

int joshua.pro.PROCore.textNormMethod [private]

String joshua.pro.PROCore.tmpDirPrefix [private]

String joshua.pro.PROCore.trainingMode [private]

int joshua.pro.PROCore.validDecoderExitValue [private]

int joshua.pro.PROCore.verbosity [private]

int joshua.pro.PROCore.Xi [private]