News

MICCAI preprint is now available!

11th June, 2018

Preprint of our paper, Endoscopic navigation in the absence of CT imaging, is now available on arXiv. Find out more!


Paper accepted to MICCAI!

25th May, 2018

Our paper, "Endoscopic navigation in the absence of CT imaging", was accepted at MICCAI. Learn more!


IEEE TMI preprint is out!

8th May, 2018

Preprint of our paper, Evaluation and Stability Analysis of Video-Based Navigation System for Functional Endoscopic Sinus Surgery on In-Vivo Clinical Data, is now available! Read more here!


Research

For projects from both academia and industry, visit my LinkedIn page.

Sinus Project

Segmentation and statistical modeling of anatomical structures for deformable registration.

Geodesics using Waves

Efficient estimation of geodesics on manifolds using properties of wave propagation.

Connectomics

Automatic annotation of fine structures within neurons in order to establish connections.

Genome Sequencing

Fast and accurate genome reads to reference alignment using fast fourier transforms.

3D Reconstruction

3D reconstruction of a Hopkins landmark voted best demo in a Computer Vision course.

Sorting using CUDA

Comparison between different sorting algorithms implemented in parallel using NVIDIA's CUDA.

Publications

Get more information on my Google Scholar page, or check out my CV.

Peer-reviewed

Endoscopic navigation in the absence of CT imaging

A Sinha, X Liu, A Reiter, M Ishii, GD Hager, RH Taylor

MICCAI, Grenada, Spain. 2018. Proceedings in Medical Image Computing and Computer-Assisted Intervension -- MICCAI 2018 (October, 2018)

Evaluation and Stability Analysis of Video-Based Navigation System for Functional Endoscopic Sinus Surgery on In-Vivo Clinical Data

S Leonard, A Sinha, A Reiter, M Ishii, GL Galia, RH Taylor, GD Hager

Early Access. IEEE TMI (May, 2018)

Simultaneous segmentation and correspondence improvement using statistical modes

A Sinha, A. Reiter, S Leonard, M Ishii, GD Hager, RH Taylor

SPIE Medical Imaging, Orlando, FL. 2017. Proceedings in SPIE Digital Library, Proc. SPIE 10133, Medical Imaging 2017: Image Processing, 101331B (February 24, 2017)
Robert F. Wagner Best Student Paper Award Finalist, 2017
[pdf]   [slides]   [video]   [citation]   [bib]

Anatomically constrained Video-CT registration via the V-IMLOP algorithm

Seth D. Billings, A Sinha, A. Reiter, S Leonard, M Ishii, GD Hager, RH Taylor

MICCAI, Athens, Greece. 2016. Proceedings in Medical Image Computing and Computer-Assisted Intervension -- MICCAI 2016, 19th International Conference, Athens, Greece, October 17-21, 2016, Proceedings, Part III. Vol. 9902: pp. 133-141
[pdf]   [erratum]   [citation]   [bib]

Automatic segmentation and statistical shape modeling of the paranasal sinuses to estimate natural variations

A Sinha, S Leonard, A Reiter, M Ishii, RH Taylor, GD Hager

SPIE Medical Imaging, San Diego, CA. 2016. Proceedings in SPIE Digital Library, Proc. SPIE 9784, Medical Imaging 2016: Image Processing, 97840D (March 21, 2016)
[pdf]   [slides]   [citation]   [bib]

Image-based navigation for functional endoscopic sinus surgery using structure from motion

S Leonard, A Reiter, A Sinha, M Ishii, RH Taylor, GD Hager

SPIE Medical Imaging, San Diego, CA. 2016. Proceedings in SPIE Digital Library, Proc. SPIE 9784, Medical Imaging 2016: Image Processing, 97840V (March 21, 2016)
[pdf]   [slides]   [citation]   [bib]

Endoscopic-CT: learning-based photometric reconstruction for endoscopic sinus surgery

A Reiter, S Leonard, A Sinha, M Ishii, RH Taylor, GD Hager

SPIE Medical Imaging, San Diego, CA. 2016. Proceedings in SPIE Digital Library, Proc. SPIE 9784, Medical Imaging 2016: Image Processing, 978418 (March 21, 2016)
[pdf]   [slides]   [citation]   [bib]

Automatic Annotation of 3D Axoplasmic Reticula for Neuron Segmentation

A Sinha, WG Roncal, N Kasthuri, JW Lichtman, R Burns

Resting State Brain Connectivity, Boston/Cambridge, MA. 2014. Proceedings in Brain Connectivity, Vol. 4(9): pp. A26 (November 21, 2014)

Non peer-reviewed

Geodesics using Waves: Computing Distances using Wave Propagation

A Sinha, M Kazhdan

The Johns Hopkins University, Baltimore, MD. 2014. Submitted as Master's project (May 21, 2014)

Automatic Annotation of Axoplasmic Reticula in Pursuit of Connectomes using High Resolution Neural EM Data

A Sinha, WG Roncal, N Kasthuri, JW Lichtman, R Burns, M Kazhdan

Hopkins Imaging Conference, Baltimore, MD (November 21, 2013)

Sorting on CUDA

A Sinha

Annual Celebration of Student Scholarship and Creativity, Providence, RI (April 13, 2011)

Talks

Contact me

Department of Computer Science
The Johns Hopkins University
160 Malone Hall
3400 N. Charles St.
Baltimore MD 21218-2608

Desk

Malone Center for Engineering in Healthcare
340 Malone Hall

Email

sinha(at)jhu(dot)edu

More information

To learn more about my work experience and hobbies, click below!